STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK05052.1PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sli:Slin_2585 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1. (382 aa)    
Predicted Functional Partners:
AFK05053.1
PFAM: Acyltransferase family; COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: ran:Riean_0852 acyltransferase 3; PFAM: Acyltransferase 3; SPTR: Acyltransferase 3.
  
  
 0.778
AFK04089.1
PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG5305 membrane protein; KEGG: sli:Slin_2543 hypothetical protein; SPTR: Membrane protein-like protein.
  
     0.695
AFK04054.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyp:PCC8801_3357 group 1 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1.
  
     0.653
AFK02041.1
PFAM: Domain of unknown function (DUF303); InterPro IPR005181; KEGG: sli:Slin_5096 hypothetical protein; PFAM: Protein of unknown function DUF303, acetylesterase putative; SPTR: Putative uncharacterized protein.
  
     0.622
AFK02507.1
KEGG: lby:Lbys_1706 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.595
AFK02584.1
Hypothetical protein; KEGG: dfe:Dfer_3053 isoamylase N-terminal domain protein; SPTR: Isoamylase N-terminal domain protein.
  
 0.569
AFK05408.1
PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017473:IPR017475; KEGG: cpi:Cpin_2278 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glyc [...]
 
  
 0.554
AFK04283.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: phe:Phep_4047 group 1 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family protein.
  
     0.534
AFK04740.1
PFAM: Domain of unknown function (DUF303); InterPro IPR005181; KEGG: sli:Slin_5096 hypothetical protein; PFAM: Protein of unknown function DUF303, acetylesterase putative; SPTR: Putative uncharacterized protein.
  
     0.517
AFK01633.1
PFAM: LysM domain; InterPro IPR002482:IPR018392; KEGG: sli:Slin_5996 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidoglycan-binding lysin domain protein.
  
    0.505
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.