STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK05085.1Chorismate mutase; PFAM: Prephenate dehydratase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; COGs: COG0077 Prephenate dehydratase; InterPro IPR010957:IPR020822:IPR001086:IPR002912; KEGG: lby:Lbys_0057 chorismate mutase; prephenate dehydratase; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; SPTR: Chorismate mutase; prephenate dehydratase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain. (357 aa)    
Predicted Functional Partners:
AFK04423.1
DAHP synthetase I/KDSA; PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR020822; KEGG: lby:Lbys_0765 dahp synthetase I/KdsA; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II; SPTR: DAHP synthetase I/KDSA.
 
 
 0.997
AFK03141.1
PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: lby:Lbys_2637 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase class I and II.
 
 
 0.992
AFK04659.1
PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; COGs: COG0082 Chorismate synthase; InterPro IPR000453; KEGG: dfe:Dfer_4064 chorismate synthase; PFAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: Chorismate synthase.
 
 
 0.983
AFK05001.1
NADP oxidoreductase coenzyme F420-dependent; PFAM: Prephenate dehydrogenase; COGs: COG0287 Prephenate dehydrogenase; InterPro IPR004455; KEGG: lby:Lbys_1216 prephenate dehydrogenase (nadp(+)); PFAM: NADP oxidoreductase, coenzyme F420-dependent; SPTR: Prephenate dehydrogenase (NADP(+)); manually curated.
 
 0.965
AFK03222.1
PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR006221:IPR000991; KEGG: lby:Lbys_2174 anthranilate synthase, component II; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Anthranilate synthase, component II; TIGRFAM: Glutamine amidotransferase of anthranilate synthase.
 
 
 0.952
AFK03221.1
PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: lby:Lbys_2173 anthranilate synthase; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; SPTR: Anthranilate synthase.
 
 
 0.951
AFK03654.1
PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839; KEGG: dfe:Dfer_2627 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase class I and II.
  
 
 0.945
AFK04163.1
PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR005861:IPR004839; KEGG: lby:Lbys_0732 histidinol phosphate aminotransferase apoenzyme; PFAM: Aminotransferase, class I/II; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase.
  
 
 0.945
AFK04771.1
PFAM: Biopterin-dependent aromatic amino acid hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase, monomeric form; COGs: COG3186 Phenylalanine-4-hydroxylase; InterPro IPR019774; KEGG: sli:Slin_6319 phenylalanine-4-hydroxylase; PFAM: Aromatic amino acid hydroxylase, C-terminal; SPTR: Phenylalanine-4-hydroxylase.
     
 0.926
AFK03492.1
PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases; COGs: COG1169 Isochorismate synthase; InterPro IPR015890; KEGG: sli:Slin_0770 chorismate binding-like protein; PFAM: Chorismate binding, C-terminal; SPTR: Chorismate binding-like protein.
 
 
 0.912
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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