STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK05179.1Glycosyl hydrolase family 98 putative carbohydrate binding module; PFAM: Domain of unknown function (DUF303); NPCBM/NEW2 domain; Fibronectin type III domain; InterPro IPR013222:IPR003961; KEGG: lby:Lbys_1706 hypothetical protein; PFAM: Glycosyl hydrolase family 98, putative carbohydrate-binding module; Fibronectin, type III; SMART: Glycosyl hydrolase family 98, putative carbohydrate-binding module; Fibronectin, type III; SPTR: Putative uncharacterized protein. (877 aa)    
Predicted Functional Partners:
AFK04089.1
PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG5305 membrane protein; KEGG: sli:Slin_2543 hypothetical protein; SPTR: Membrane protein-like protein.
  
     0.667
AFK03196.1
PFAM: PKD domain; InterPro IPR000601; KEGG: lby:Lbys_2954 hypothetical protein; PFAM: PKD; SPTR: Putative uncharacterized protein.
  
    0.595
AFK01633.1
PFAM: LysM domain; InterPro IPR002482:IPR018392; KEGG: sli:Slin_5996 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidoglycan-binding lysin domain protein.
  
     0.554
AFK02174.1
PFAM: Thioredoxin; KEGG: lby:Lbys_1516 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
     0.549
AFK05178.1
PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725:IPR013126; KEGG: lby:Lbys_0731 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein DnaK; TIGRFAM: Chaperone DnaK.
  
    0.535
AFK02452.1
KEGG: sli:Slin_3228 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.533
AFK02159.1
Putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: lby:Lbys_3486 membrane protein; SPTR: Putative membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes.
  
     0.527
AFK05333.1
InterPro IPR019734:IPR001440; KEGG: lby:Lbys_0896 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_1 repeat-containing protein.
 
     0.469
AFK02279.1
KEGG: cja:CJA_2037 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.460
AFK03326.1
KEGG: lby:Lbys_2835 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.460
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.