STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK05222.1Hypothetical protein; COGs: COG2068 Uncharacterized MobA-related protein; KEGG: cyt:cce_3339 hypothetical protein; SPTR: Putative uncharacterized protein. (200 aa)    
Predicted Functional Partners:
AFK03152.1
XshC-Cox1-family protein; PFAM: XdhC and CoxI family; COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: sli:Slin_5428 xanthine dehydrogenase; PFAM: XdhC- CoxI; SPTR: Xanthine dehydrogenase.
  
 0.987
AFK03155.1
Molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: molybdenum cofactor synthesis domain-containing protein; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; SPTR: Molybdopterin biosynthesis MoeA protein; TIGRFAM: Molybdenum cofactor synthesis.
   
  0.926
AFK03448.1
Hypothetical protein; COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: sli:Slin_2808 hypothetical protein; SPTR: Molybdenum cofactor biosynthesis protein C.
    
 0.910
AFK01699.1
(2Fe-2S)-binding domain-containing protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: sli:Slin_1103 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: (2Fe-2S)-binding domain protein.
 
  
 0.782
AFK03369.1
(2Fe-2S)-binding domain-containing protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: sli:Slin_6243 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: (2Fe-2S)-binding domain protein.
 
  
 0.782
AFK04471.1
(2Fe-2S)-binding domain-containing protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: Isoquinoline 1-oxidoreductase; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: Putative isoquinoline 1-oxidoreductase alpha subunit.
 
  
 0.779
AFK04486.1
(2Fe-2S)-binding domain-containing protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: Isoquinoline 1-oxidoreductase; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: (2Fe-2S)-binding domain protein.
 
  
 0.778
AFK05221.1
PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: cpi:Cpin_2595 lipid A biosynthesis acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis acyltransferase.
       0.775
AFK05223.1
PFAM: RES domain; COGs: COG5654 conserved hypothetical protein; InterPro IPR014914; KEGG: sli:Slin_2003 RES domain protein; PFAM: RES; SPTR: RES domain protein.
       0.773
AFK05224.1
Conserved hypothetical protein CHP02293; PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family; InterPro IPR011979; KEGG: sli:Slin_2004 hypothetical protein; PFAM: Conserved hypothetical protein CHP02293; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02293.
       0.773
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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