STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519325_00663Unannotated protein. (461 aa)    
Predicted Functional Partners:
GCA_000519325_00668
Unannotated protein.
 
  0.934
GCA_000519325_00669
Unannotated protein.
 
  0.929
GCA_000519325_00007
Unannotated protein.
 
  0.861
GCA_000519325_04918
Unannotated protein.
 
  0.845
GCA_000519325_00664
Unannotated protein.
 
    
0.839
GCA_000519325_00662
Unannotated protein.
 
    
0.837
GCA_000519325_04919
Unannotated protein.
 
  0.826
GCA_000519325_04303
Unannotated protein.
 
  0.815
GCA_000519325_05111
Unannotated protein.
 
  0.815
GCA_000519325_00522
Unannotated protein.
 
  0.813
Your Current Organism:
Patulibacter minatonensis
NCBI taxonomy Id: 929712
Other names: P. minatonensis DSM 18081, Patulibacter minatonensis DSM 18081, Patulibacter minatonensis KV-614, Patulibacter minatonensis str. DSM 18081, Patulibacter minatonensis strain DSM 18081, actinobacterium KV-614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.