STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519325_01827Unannotated protein. (168 aa)    
Predicted Functional Partners:
GCA_000519325_01828
Unannotated protein.
       0.773
GCA_000519325_01829
Unannotated protein.
  
    0.602
GCA_000519325_01474
Unannotated protein.
  
     0.554
GCA_000519325_01826
Unannotated protein.
       0.530
GCA_000519325_04356
Unannotated protein.
    
 0.465
GCA_000519325_01891
Unannotated protein.
  
  
  0.445
GCA_000519325_02334
Unannotated protein.
 
 
 0.437
GCA_000519325_04405
Unannotated protein.
  
 
  0.432
GCA_000519325_03730
Unannotated protein.
 
 
 0.401
Your Current Organism:
Patulibacter minatonensis
NCBI taxonomy Id: 929712
Other names: P. minatonensis DSM 18081, Patulibacter minatonensis DSM 18081, Patulibacter minatonensis KV-614, Patulibacter minatonensis str. DSM 18081, Patulibacter minatonensis strain DSM 18081, actinobacterium KV-614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.