STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519325_03162Unannotated protein. (368 aa)    
Predicted Functional Partners:
GCA_000519325_00645
Unannotated protein.
 
      0.899
GCA_000519325_04814
Unannotated protein.
    
 0.821
GCA_000519325_02114
Unannotated protein.
    
  0.760
GCA_000519325_03546
Unannotated protein.
  
  
 
0.670
GCA_000519325_02889
Unannotated protein.
  
 
 0.667
GCA_000519325_03160
Unannotated protein.
       0.548
GCA_000519325_03161
Unannotated protein.
       0.548
GCA_000519325_02890
Unannotated protein.
   
 
 0.481
GCA_000519325_02661
Unannotated protein.
   
  0.464
GCA_000519325_04863
Unannotated protein.
   
    0.426
Your Current Organism:
Patulibacter minatonensis
NCBI taxonomy Id: 929712
Other names: P. minatonensis DSM 18081, Patulibacter minatonensis DSM 18081, Patulibacter minatonensis KV-614, Patulibacter minatonensis str. DSM 18081, Patulibacter minatonensis strain DSM 18081, actinobacterium KV-614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.