STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519325_04848Unannotated protein. (120 aa)    
Predicted Functional Partners:
GCA_000519325_04849
Unannotated protein.
       0.806
GCA_000519325_04850
Unannotated protein.
       0.679
GCA_000519325_04846
Unannotated protein.
       0.655
GCA_000519325_04847
Unannotated protein.
       0.655
Your Current Organism:
Patulibacter minatonensis
NCBI taxonomy Id: 929712
Other names: P. minatonensis DSM 18081, Patulibacter minatonensis DSM 18081, Patulibacter minatonensis KV-614, Patulibacter minatonensis str. DSM 18081, Patulibacter minatonensis strain DSM 18081, actinobacterium KV-614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.