STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF15803.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
AHF15777.1
NADH-dependent dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.765
AHF14250.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.764
AHF14249.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.762
AHF16296.1
NADH-dependent dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.759
AHF14984.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.728
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.694
AHF16295.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.684
AHF14686.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.681
AHF16103.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.662
AHF16142.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
Your Current Organism:
Niabella soli
NCBI taxonomy Id: 929713
Other names: N. soli DSM 19437, Niabella soli DSM 19437, Niabella soli JS13-8, Niabella soli str. DSM 19437, Niabella soli strain DSM 19437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.