STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resESensor histidine kinase ResE. (501 aa)    
Predicted Functional Partners:
glrR_1
Transcriptional regulatory protein GlrR.
 
 
  0.985
pdhD_2
Dihydrolipoyl dehydrogenase.
    
 0.975
rbsB
Ribose import binding protein RbsB.
 
  
 
 0.942
glrK
Sensor histidine kinase GlrK.
  
0.935
glrR_2
Transcriptional regulatory protein GlrR.
  
 
  0.925
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.906
ompR_3
Transcriptional regulatory protein OmpR.
 
 0.894
phoB_2
Phosphate regulon transcriptional regulatory protein PhoB.
 
 0.883
ompR_1
Transcriptional regulatory protein OmpR.
 
 0.877
qseB
Transcriptional regulatory protein QseB.
 
 0.874
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.