STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002079865_00785Hypothetical protein. (193 aa)    
Predicted Functional Partners:
GCA_002079865_00786
Hypothetical protein.
 
 
 0.996
GCA_002079865_00784
Hypothetical protein.
 
 
 0.993
GCA_002079865_00783
Hypothetical protein.
 
 
 0.992
pilQ_1
Type IV pilus biogenesis and competence protein PilQ.
 
 
 0.988
A6M23_01795
Hypothetical protein.
 
 
 0.983
GCA_002079865_03924
Hypothetical protein.
 
 
 0.979
A6M23_01805
Hypothetical protein.
 
 
 0.972
A6M23_01810
Hypothetical protein.
 
 
 0.972
pilQ_2
Type IV pilus biogenesis and competence protein PilQ.
 
 
 0.968
A6P07_16685
Hypothetical protein.
  
 
   0.878
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.