STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hybGHydrogenase-2 operon protein HybG. (97 aa)    
Predicted Functional Partners:
hypD
Hydrogenase expression/formation protein HypD.
 
 
 0.999
hypE
Hydrogenase isoenzymes formation protein HypE.
 
 
 0.998
hypB
Hydrogenase isoenzymes nickel incorporation protein HypB.
 
  
 0.997
hypF
Carbamoyltransferase HypF.
 
 
 0.975
hypA
Hydrogenase nickel incorporation protein HypA.
 
  
 0.961
Unknown-2
Periplasmic [NiFeSe] hydrogenase large subunit.
 
 
 0.887
GCA_002079865_01178
Hypothetical protein.
 
     0.846
hydA
Periplasmic [NiFe] hydrogenase small subunit.
 
 
 0.842
nfuA
Fe/S biogenesis protein NfuA.
 
     0.835
hybD
Hydrogenase 2 maturation protease.
 
  
 0.823
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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