Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A6M23_02585 | A6M23_20020 | GCA_002079865_03661 | GCA_002079865_02045 | Hypothetical protein. | Hypothetical protein. | 0.647 |
A6M23_02585 | GCA_002079865_03924 | GCA_002079865_03661 | GCA_002079865_03924 | Hypothetical protein. | Hypothetical protein. | 0.430 |
A6M23_02585 | ftsL | GCA_002079865_03661 | GCA_002079865_02477 | Hypothetical protein. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.500 |
A6M23_15235 | A6M23_20020 | GCA_002079865_03322 | GCA_002079865_02045 | Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein. | 0.587 |
A6M23_20020 | A6M23_02585 | GCA_002079865_02045 | GCA_002079865_03661 | Hypothetical protein. | Hypothetical protein. | 0.647 |
A6M23_20020 | A6M23_15235 | GCA_002079865_02045 | GCA_002079865_03322 | Hypothetical protein. | Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.587 |
A6M23_20020 | GCA_002079865_00783 | GCA_002079865_02045 | GCA_002079865_00783 | Hypothetical protein. | Hypothetical protein. | 0.580 |
A6M23_20020 | GCA_002079865_03924 | GCA_002079865_02045 | GCA_002079865_03924 | Hypothetical protein. | Hypothetical protein. | 0.586 |
A6M23_20020 | PilB | GCA_002079865_02045 | GCA_002079865_00780 | Hypothetical protein. | Hypothetical protein. | 0.598 |
A6M23_20020 | cas9_1 | GCA_002079865_02045 | GCA_002079865_00151 | Hypothetical protein. | CRISPR-associated endonuclease Cas9. | 0.572 |
A6M23_20020 | cas9_2 | GCA_002079865_02045 | GCA_002079865_02547 | Hypothetical protein. | CRISPR-associated endonuclease Cas9. | 0.598 |
A6M23_20020 | ftsL | GCA_002079865_02045 | GCA_002079865_02477 | Hypothetical protein. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.662 |
A6M23_20020 | lapB | GCA_002079865_02045 | GCA_002079865_02186 | Hypothetical protein. | Lipopolysaccharide assembly protein B. | 0.648 |
A6M23_20020 | pnp | GCA_002079865_02045 | GCA_002079865_00533 | Hypothetical protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.552 |
GCA_002079865_00783 | A6M23_20020 | GCA_002079865_00783 | GCA_002079865_02045 | Hypothetical protein. | Hypothetical protein. | 0.580 |
GCA_002079865_00783 | GCA_002079865_03924 | GCA_002079865_00783 | GCA_002079865_03924 | Hypothetical protein. | Hypothetical protein. | 0.730 |
GCA_002079865_00783 | PilB | GCA_002079865_00783 | GCA_002079865_00780 | Hypothetical protein. | Hypothetical protein. | 0.547 |
GCA_002079865_00783 | ftsL | GCA_002079865_00783 | GCA_002079865_02477 | Hypothetical protein. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.456 |
GCA_002079865_03924 | A6M23_02585 | GCA_002079865_03924 | GCA_002079865_03661 | Hypothetical protein. | Hypothetical protein. | 0.430 |
GCA_002079865_03924 | A6M23_20020 | GCA_002079865_03924 | GCA_002079865_02045 | Hypothetical protein. | Hypothetical protein. | 0.586 |
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