STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nasDNitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (814 aa)    
Predicted Functional Partners:
nasE
Assimilatory nitrite reductase [NAD(P)H] small subunit.
 
 0.999
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.986
nfuA
Fe/S biogenesis protein NfuA.
  
 
 0.985
narG
Respiratory nitrate reductase 1 alpha chain.
  
  
 0.882
cmpC
Bicarbonate transport ATP-binding protein CmpC.
 
  
 0.851
pdtaR
Putative transcriptional regulatory protein pdtaR.
 
  
 0.830
cobA
Uroporphyrinogen-III C-methyltransferase.
 
  
 0.759
A6M23_00095
Hypothetical protein.
 
  
 0.719
narY
Respiratory nitrate reductase 2 beta chain.
  
  
 0.570
gltB
Glutamate synthase [NADPH] large chain.
  
  
 0.565
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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