STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttgBToluene efflux pump membrane transporter TtgB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1260 aa)    
Predicted Functional Partners:
A6M23_19265
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.965
mdtA_5
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.835
A6M23_15290
Hypothetical protein.
     
 0.787
A6M23_09260
Hypothetical protein.
 
     0.746
exbD_1
Biopolymer transport protein ExbD.
  
 
 0.700
exbD_2
Biopolymer transport protein ExbD.
  
 
 0.700
exbD_3
Biopolymer transport protein ExbD.
  
 
 0.700
GCA_002079865_02271
Hypothetical protein.
       0.631
A6P07_02355
Hypothetical protein.
  
 
 0.617
A6M23_00990
Hypothetical protein.
  
 
 0.612
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.