STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsKDNA translocase FtsK. (776 aa)    
Predicted Functional Partners:
GCA_002079865_01178
Hypothetical protein.
   
 
 0.940
rarA
Replication-associated recombination protein A.
  
 0.907
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
   
 
 0.900
lolA
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
  
 0.894
parB_5
Putative chromosome-partitioning protein ParB; Belongs to the ParB family.
  
   
 0.738
lrp
Leucine-responsive regulatory protein.
    
 0.731
A6P07_13510
Hypothetical protein.
       0.727
parB_4
Putative chromosome-partitioning protein ParB; Belongs to the ParB family.
  
   
 0.725
parB_6
Putative chromosome-partitioning protein ParB.
  
   
 0.725
parB_1
Putative chromosome-partitioning protein ParB.
  
   
 0.724
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.