Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A6M23_03185 | A6M23_03195 | GCA_002079865_02462 | GCA_002079865_02461 | Hypothetical protein. | Hypothetical protein. | 0.810 |
A6M23_03185 | A6M23_03210 | GCA_002079865_02462 | GCA_002079865_02458 | Hypothetical protein. | Hypothetical protein. | 0.961 |
A6M23_03185 | WaaE | GCA_002079865_02462 | GCA_002079865_02460 | Hypothetical protein. | Hypothetical protein. | 0.835 |
A6M23_03185 | argJ | GCA_002079865_02462 | GCA_002079865_02467 | Hypothetical protein. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.709 |
A6M23_03185 | bshA_1 | GCA_002079865_02462 | GCA_002079865_02463 | Hypothetical protein. | N-acetyl-alpha-D-glucosaminyl L-malate synthase. | 0.712 |
A6M23_03185 | icaB | GCA_002079865_02462 | GCA_002079865_02464 | Hypothetical protein. | Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase. | 0.718 |
A6M23_03185 | mutT | GCA_002079865_02462 | GCA_002079865_02466 | Hypothetical protein. | 8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. | 0.709 |
A6M23_03185 | rfaC | GCA_002079865_02462 | GCA_002079865_02459 | Hypothetical protein. | Lipopolysaccharide heptosyltransferase 1. | 0.811 |
A6M23_03185 | rgtE | GCA_002079865_02462 | GCA_002079865_02465 | Hypothetical protein. | Dodecaprenyl-phosphate galacturonate synthase. | 0.716 |
A6M23_03185 | waaA | GCA_002079865_02462 | GCA_002079865_02457 | Hypothetical protein. | 3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.796 |
A6M23_03195 | A6M23_03185 | GCA_002079865_02461 | GCA_002079865_02462 | Hypothetical protein. | Hypothetical protein. | 0.810 |
A6M23_03195 | A6M23_03210 | GCA_002079865_02461 | GCA_002079865_02458 | Hypothetical protein. | Hypothetical protein. | 0.811 |
A6M23_03195 | WaaE | GCA_002079865_02461 | GCA_002079865_02460 | Hypothetical protein. | Hypothetical protein. | 0.817 |
A6M23_03195 | argJ | GCA_002079865_02461 | GCA_002079865_02467 | Hypothetical protein. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.709 |
A6M23_03195 | bshA_1 | GCA_002079865_02461 | GCA_002079865_02463 | Hypothetical protein. | N-acetyl-alpha-D-glucosaminyl L-malate synthase. | 0.749 |
A6M23_03195 | icaB | GCA_002079865_02461 | GCA_002079865_02464 | Hypothetical protein. | Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase. | 0.738 |
A6M23_03195 | mutT | GCA_002079865_02461 | GCA_002079865_02466 | Hypothetical protein. | 8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. | 0.709 |
A6M23_03195 | rfaC | GCA_002079865_02461 | GCA_002079865_02459 | Hypothetical protein. | Lipopolysaccharide heptosyltransferase 1. | 0.982 |
A6M23_03195 | rgtE | GCA_002079865_02461 | GCA_002079865_02465 | Hypothetical protein. | Dodecaprenyl-phosphate galacturonate synthase. | 0.719 |
A6M23_03195 | waaA | GCA_002079865_02461 | GCA_002079865_02457 | Hypothetical protein. | 3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.978 |
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