Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A6P07_10165 | exoA | GCA_002079865_00372 | GCA_002079865_02537 | Hypothetical protein. | Exodeoxyribonuclease. | 0.809 |
A6P07_10165 | mutY | GCA_002079865_00372 | GCA_002079865_02567 | Hypothetical protein. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.487 |
A6P07_10165 | polA_1 | GCA_002079865_00372 | GCA_002079865_00289 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.995 |
A6P07_10165 | polA_2 | GCA_002079865_00372 | GCA_002079865_01041 | Hypothetical protein. | DNA polymerase I. | 0.995 |
A6P07_10165 | xthA | GCA_002079865_00372 | GCA_002079865_02533 | Hypothetical protein. | Exodeoxyribonuclease III. | 0.809 |
birA | exoA | GCA_002079865_00594 | GCA_002079865_02537 | Bifunctional ligase/repressor BirA. | Exodeoxyribonuclease. | 0.857 |
birA | hfq | GCA_002079865_00594 | GCA_002079865_03127 | Bifunctional ligase/repressor BirA. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.432 |
birA | mutY | GCA_002079865_00594 | GCA_002079865_02567 | Bifunctional ligase/repressor BirA. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.529 |
birA | xthA | GCA_002079865_00594 | GCA_002079865_02533 | Bifunctional ligase/repressor BirA. | Exodeoxyribonuclease III. | 0.857 |
exoA | A6P07_10165 | GCA_002079865_02537 | GCA_002079865_00372 | Exodeoxyribonuclease. | Hypothetical protein. | 0.809 |
exoA | birA | GCA_002079865_02537 | GCA_002079865_00594 | Exodeoxyribonuclease. | Bifunctional ligase/repressor BirA. | 0.857 |
exoA | hemH | GCA_002079865_02537 | GCA_002079865_02532 | Exodeoxyribonuclease. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.498 |
exoA | hfq | GCA_002079865_02537 | GCA_002079865_03127 | Exodeoxyribonuclease. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.848 |
exoA | mutY | GCA_002079865_02537 | GCA_002079865_02567 | Exodeoxyribonuclease. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.844 |
exoA | nth | GCA_002079865_02537 | GCA_002079865_03603 | Exodeoxyribonuclease. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.954 |
exoA | polA_1 | GCA_002079865_02537 | GCA_002079865_00289 | Exodeoxyribonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.840 |
exoA | polA_2 | GCA_002079865_02537 | GCA_002079865_01041 | Exodeoxyribonuclease. | DNA polymerase I. | 0.840 |
exoA | xthA | GCA_002079865_02537 | GCA_002079865_02533 | Exodeoxyribonuclease. | Exodeoxyribonuclease III. | 0.958 |
exoA | yibF | GCA_002079865_02537 | GCA_002079865_02534 | Exodeoxyribonuclease. | Putative GST-like protein YibF. | 0.469 |
hemH | exoA | GCA_002079865_02532 | GCA_002079865_02537 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Exodeoxyribonuclease. | 0.498 |
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