STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoB_3Phosphate regulon transcriptional regulatory protein PhoB. (269 aa)    
Predicted Functional Partners:
phoR
Phosphate regulon sensor protein PhoR.
 
 0.983
phoB_2
Phosphate regulon transcriptional regulatory protein PhoB.
  
  
 
0.913
gmr_4
Cyclic di-GMP phosphodiesterase Gmr.
 
 
 0.909
kdpD
Sensor protein KdpD.
   
 
 0.628
phoU
Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake.
 
  
 0.608
ompR_2
Transcriptional regulatory protein OmpR.
  
   
 0.569
ompR_1
Transcriptional regulatory protein OmpR.
  
   
 0.563
ompR_3
Transcriptional regulatory protein OmpR.
  
   
 0.562
envZ_1
Osmolarity sensor protein EnvZ.
  
 
 0.560
pstC1
Phosphate transport system permease protein PstC 1; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
   
 0.555
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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