STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdR_2Type I restriction enzyme EcoR124II R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. (571 aa)    
Predicted Functional Partners:
hsdR_1
Type I restriction enzyme EcoR124II R protein.
     0.994
HsdM-2
Putative type I restriction enzymeP M protein.
 
 0.993
HsdS
Putative type-1 restriction enzyme specificity protein MG438.
 
  
 0.973
A6P07_19335
Hypothetical protein.
       0.781
A6P07_19345
Hypothetical protein.
       0.781
A6P07_19350
Hypothetical protein.
       0.780
nlpE
Lipoprotein NlpE.
       0.773
GCA_002079865_00837
Putative type I restriction enzymeP M protein.
  
 
 0.671
A6P07_19835
Hypothetical protein.
       0.671
moaB
Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.666
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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