Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TnsD | glmS | GCA_002079865_04017 | GCA_002079865_03030 | Hypothetical protein. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.822 |
| TnsD | glmU | GCA_002079865_04017 | GCA_002079865_03029 | Hypothetical protein. | Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.786 |
| TnsD | tnsA | GCA_002079865_04017 | GCA_002079865_03040 | Hypothetical protein. | Transposon Tn7 transposition protein TnsA. | 0.953 |
| TnsD | tnsC | GCA_002079865_04017 | GCA_002079865_04016 | Hypothetical protein. | Transposon Tn7 transposition protein TnsC. | 0.762 |
| TnsD | tnsE | GCA_002079865_04017 | GCA_002079865_04018 | Hypothetical protein. | Transposon Tn7 transposition protein TnsE. | 0.953 |
| folP | tnsA | GCA_002079865_00616 | GCA_002079865_03040 | Dihydropteroate synthase. | Transposon Tn7 transposition protein TnsA. | 0.599 |
| frp | tnsA | GCA_002079865_03039 | GCA_002079865_03040 | NADPH-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family. | Transposon Tn7 transposition protein TnsA. | 0.559 |
| glmS | TnsD | GCA_002079865_03030 | GCA_002079865_04017 | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Hypothetical protein. | 0.822 |
| glmS | glmU | GCA_002079865_03030 | GCA_002079865_03029 | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.992 |
| glmS | tnsA | GCA_002079865_03030 | GCA_002079865_03040 | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Transposon Tn7 transposition protein TnsA. | 0.805 |
| glmS | tnsC | GCA_002079865_03030 | GCA_002079865_04016 | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Transposon Tn7 transposition protein TnsC. | 0.760 |
| glmS | tnsE | GCA_002079865_03030 | GCA_002079865_04018 | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Transposon Tn7 transposition protein TnsE. | 0.808 |
| glmU | TnsD | GCA_002079865_03029 | GCA_002079865_04017 | Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Hypothetical protein. | 0.786 |
| glmU | glmS | GCA_002079865_03029 | GCA_002079865_03030 | Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.992 |
| glmU | tnsA | GCA_002079865_03029 | GCA_002079865_03040 | Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Transposon Tn7 transposition protein TnsA. | 0.798 |
| glmU | tnsC | GCA_002079865_03029 | GCA_002079865_04016 | Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Transposon Tn7 transposition protein TnsC. | 0.760 |
| tnsA | TnsD | GCA_002079865_03040 | GCA_002079865_04017 | Transposon Tn7 transposition protein TnsA. | Hypothetical protein. | 0.953 |
| tnsA | folP | GCA_002079865_03040 | GCA_002079865_00616 | Transposon Tn7 transposition protein TnsA. | Dihydropteroate synthase. | 0.599 |
| tnsA | frp | GCA_002079865_03040 | GCA_002079865_03039 | Transposon Tn7 transposition protein TnsA. | NADPH-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family. | 0.559 |
| tnsA | glmS | GCA_002079865_03040 | GCA_002079865_03030 | Transposon Tn7 transposition protein TnsA. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.805 |
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