Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aaeA | aaeB | GCA_002079865_03204 | GCA_002079865_03202 | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | P-hydroxybenzoic acid efflux pump subunit AaeB. | 0.963 |
aaeA | aaeX | GCA_002079865_03204 | GCA_002079865_03203 | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Protein AaeX. | 0.809 |
aaeA | emrB_4 | GCA_002079865_03204 | GCA_002079865_02541 | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multidrug export protein EmrB. | 0.618 |
aaeA | mdtA_3 | GCA_002079865_03204 | GCA_002079865_02820 | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.649 |
aaeA | nnr | GCA_002079865_03204 | GCA_002079865_03195 | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.547 |
aaeA | oprM_4 | GCA_002079865_03204 | GCA_002079865_03201 | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Outer membrane protein OprM. | 0.920 |
aaeA | tsaE | GCA_002079865_03204 | GCA_002079865_03198 | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.548 |
aaeB | aaeA | GCA_002079865_03202 | GCA_002079865_03204 | P-hydroxybenzoic acid efflux pump subunit AaeB. | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.963 |
aaeB | aaeX | GCA_002079865_03202 | GCA_002079865_03203 | P-hydroxybenzoic acid efflux pump subunit AaeB. | Protein AaeX. | 0.835 |
aaeB | nnr | GCA_002079865_03202 | GCA_002079865_03195 | P-hydroxybenzoic acid efflux pump subunit AaeB. | Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.554 |
aaeB | oprM_4 | GCA_002079865_03202 | GCA_002079865_03201 | P-hydroxybenzoic acid efflux pump subunit AaeB. | Outer membrane protein OprM. | 0.826 |
aaeB | tsaE | GCA_002079865_03202 | GCA_002079865_03198 | P-hydroxybenzoic acid efflux pump subunit AaeB. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.548 |
aaeX | aaeA | GCA_002079865_03203 | GCA_002079865_03204 | Protein AaeX. | P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.809 |
aaeX | aaeB | GCA_002079865_03203 | GCA_002079865_03202 | Protein AaeX. | P-hydroxybenzoic acid efflux pump subunit AaeB. | 0.835 |
aaeX | nnr | GCA_002079865_03203 | GCA_002079865_03195 | Protein AaeX. | Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.544 |
aaeX | oprM_4 | GCA_002079865_03203 | GCA_002079865_03201 | Protein AaeX. | Outer membrane protein OprM. | 0.773 |
aaeX | tsaE | GCA_002079865_03203 | GCA_002079865_03198 | Protein AaeX. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.548 |
cusB | mdtA_3 | GCA_002079865_00031 | GCA_002079865_02820 | Cation efflux system protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.406 |
cusB | oprM_4 | GCA_002079865_00031 | GCA_002079865_03201 | Cation efflux system protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Outer membrane protein OprM. | 0.599 |
emrA | oprM_4 | GCA_002079865_01871 | GCA_002079865_03201 | Multidrug export protein EmrA. | Outer membrane protein OprM. | 0.615 |
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