STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002079865_03288Hypothetical protein. (69 aa)    
Predicted Functional Partners:
A6M23_14920
Hypothetical protein.
 
     0.945
A6M23_20215
Hypothetical protein.
  
     0.759
A6M23_18095
Hypothetical protein.
  
     0.511
A6M23_12500
Hypothetical protein.
  
     0.495
GCA_002079865_00047
Hypothetical protein.
  
     0.441
fliC_1
A-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
       0.436
GCA_002079865_02162
Hypothetical protein.
  
     0.412
pvuIIM
Modification methylase PvuII.
  
     0.410
GCA_002079865_00704
Hypothetical protein.
  
     0.406
GCA_002079865_00733
Hypothetical protein.
  
     0.404
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.