STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnLAlpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL. (232 aa)    
Predicted Functional Partners:
phnM
Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase.
 
 0.999
phnJ
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 0.999
phnI
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI.
 
 0.999
phnH
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH.
 
 0.999
phnG
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG.
 
 0.999
phnK
Putative phosphonates utilization ATP-binding protein PhnK.
 
0.997
yvoA
HTH-type transcriptional repressor YvoA.
 
  
 0.987
phnN
Ribose 1,5-bisphosphate phosphokinase PhnN.
 
  
 0.973
A6M23_16915
Hypothetical protein.
 
     0.954
A6M23_01475
Hypothetical protein.
  
  
 0.627
Your Current Organism:
Acidithiobacillus thiooxidans
NCBI taxonomy Id: 930
Other names: A. thiooxidans, ATCC 19377, CIP 104597, DSM 14887, JCM 3867, NCIMB 8343, Thiobacillus concretivorus, Thiobacillus crenatus, Thiobacillus lobatus, Thiobacillus thermitanus, Thiobacillus thiooxidans, Thiobacillus umbonatus, Thiobacterium thiooxydans
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