STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W6XXP6_COCCAGlycoside hydrolase family 43 protein; Belongs to the glycosyl hydrolase 43 family. (476 aa)    
Predicted Functional Partners:
W6Y1Q7_COCCA
PHD domain-containing protein.
    
 
 0.649
W6YBR0_COCCA
RXT2_N domain-containing protein.
    
 
 0.635
W6YIJ5_COCCA
Uncharacterized protein.
    
 
 0.588
W6XRB2_COCCA
Hist_deacetyl domain-containing protein.
    
 
 0.570
W6YB56_COCCA
HDAC_interact domain-containing protein.
    
 
 0.469
W6YIP0_COCCA
FAS1 domain-containing protein.
    
 
 0.469
W6Y7D4_COCCA
WD_REPEATS_REGION domain-containing protein.
    
 
 0.456
W6YYM0_COCCA
Uncharacterized protein.
    
 
 0.410
Your Current Organism:
Bipolaris zeicola
NCBI taxonomy Id: 930089
Other names: B. zeicola 26-R-13, Bipolaris zeicola 26-R-13, Cochliobolus carbonum 26-R-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.