STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W6YNF6_COCMIZn(2)-C6 fungal-type domain-containing protein. (729 aa)    
Predicted Functional Partners:
W6ZN14_COCMI
AP-1 complex subunit gamma.
    
 0.920
COCMIDRAFT_402
Clat_adaptor_s domain-containing protein.
    
 0.919
W6YZE5_COCMI
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
    
 0.785
W6ZBY8_COCMI
Uncharacterized protein.
    
 
 0.693
W6ZB64_COCMI
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.688
W6ZJ23_COCMI
Rad60-SLD_2 domain-containing protein.
    
 0.688
W6ZQ11_COCMI
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.688
W6ZBB5_COCMI
Uncharacterized protein.
    
 
 0.683
W6Z6Y5_COCMI
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.673
W6ZQ03_COCMI
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.653
Your Current Organism:
Bipolaris oryzae
NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.