STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W6ZI69_COCMIUncharacterized protein. (349 aa)    
Predicted Functional Partners:
W6YYL2_COCMI
WLM domain-containing protein.
    
 
 0.630
W6ZFE1_COCMI
Ubiquitin-like domain-containing protein.
    
 
 0.596
W6ZGK5_COCMI
Peptidase_M24 domain-containing protein.
      
 0.451
W6ZF84_COCMI
Uncharacterized protein.
    
 
 0.417
W6ZM21_COCMI
PLD phosphodiesterase domain-containing protein.
    
 
 0.417
Your Current Organism:
Bipolaris oryzae
NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.