STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W6ZLX5_COCMITFIIS central domain-containing protein. (881 aa)    
Predicted Functional Partners:
W6ZKN5_COCMI
Sister chromatid cohesion protein.
   
  
 0.929
W6YNZ8_COCMI
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.867
COCMIDRAFT_68
Uncharacterized protein.
    
  0.826
W6Z9L6_COCMI
Uncharacterized protein.
    
 0.709
W6ZG66_COCMI
RPOLD domain-containing protein.
    
  0.689
W6ZBX8_COCMI
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 
  0.677
W6Z016_COCMI
Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
  
 0.663
W6ZIK1_COCMI
HECT domain-containing protein.
   
  
 0.662
W6YUK5_COCMI
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.651
W6ZTQ6_COCMI
Uncharacterized protein.
    
 0.651
Your Current Organism:
Bipolaris oryzae
NCBI taxonomy Id: 930090
Other names: B. oryzae ATCC 44560, Bipolaris oryzae ATCC 44560, Cochliobolus miyabeanus ATCC 44560, Cochliobolus miyabeanus WK-1C
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