STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019635_03080Unannotated protein. (277 aa)    
Predicted Functional Partners:
GCA_002019635_00326
Unannotated protein.
    
  0.731
GCA_002019635_03126
Unannotated protein.
  
     0.642
GCA_002019635_03029
Unannotated protein.
  
     0.639
GCA_002019635_01805
Unannotated protein.
  
     0.613
GCA_002019635_03225
Unannotated protein.
  
     0.571
GCA_002019635_03079
Unannotated protein.
       0.554
GCA_002019635_01139
Unannotated protein.
  
     0.466
GCA_002019635_03081
Unannotated protein.
       0.441
GCA_002019635_02203
Unannotated protein.
  
     0.436
Your Current Organism:
Bacillus halosaccharovorans
NCBI taxonomy Id: 930124
Other names: B. halosaccharovorans, Bacillus halosaccharovorans Mehrshad et al. 2013, Bacillus sp. E33(2010), DSM 25387, IBRC-M 10095, strain E33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.