STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE27896.1Protein of unknown function. (227 aa)    
Predicted Functional Partners:
SFE61340.1
ATP synthase protein I.
  
     0.758
SFE33265.1
Uncharacterized protein YpbB.
  
     0.745
SFE68176.1
YtpI-like protein.
  
     0.733
SFE69654.1
Tetratricopeptide repeat-containing protein.
  
     0.732
SFE63023.1
Two-component signal transduction system YycFG, regulatory protein YycI.
  
     0.729
SFE95478.1
Nuclease-related domain-containing protein.
  
     0.723
SFE67739.1
Septation ring formation regulator.
  
     0.722
SFE29846.1
Hypothetical protein.
  
     0.715
SFE95552.1
Predicted small secreted protein.
  
     0.714
SFE70768.1
Rod shape-determining protein MreD.
  
     0.711
Your Current Organism:
Alteribacillus iranensis
NCBI taxonomy Id: 930128
Other names: A. iranensis, Alteribacillus iranensis (Bagheri et al. 2012) Azmatunnisa Begum et al. 2016, Bacillus iranensis, Bacillus iranensis Bagheri et al. 2012, Bacillus sp. X5B(2010), DSM 23995, IBRC 10446, strain X5B
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