STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE54443.1Putative spermidine/putrescine transport system substrate-binding protein. (369 aa)    
Predicted Functional Partners:
SFE54391.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.988
SFE54408.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.988
potA
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.977
SFE86761.1
Spermidine/putrescine transport system permease protein.
 
 0.951
SFE86738.1
Spermidine/putrescine transport system permease protein.
 
 
 0.950
SFE89218.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.911
potA-2
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.911
SFE80255.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.831
SFE89233.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.823
SFE54469.1
N-methylhydantoinase B.
 
     0.807
Your Current Organism:
Alteribacillus iranensis
NCBI taxonomy Id: 930128
Other names: A. iranensis, Alteribacillus iranensis (Bagheri et al. 2012) Azmatunnisa Begum et al. 2016, Bacillus iranensis, Bacillus iranensis Bagheri et al. 2012, Bacillus sp. X5B(2010), DSM 23995, IBRC 10446, strain X5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.