STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE55572.1NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. (605 aa)    
Predicted Functional Partners:
SFE55528.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.992
SFE55428.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 0.983
SFE82928.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.930
SFE55461.1
Polysaccharide pyruvyl transferase.
  
 
 0.920
SFE55378.1
UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.789
SFE56954.1
Capsular exopolysaccharide family.
 
 
 0.768
SFE38932.1
Flagellar basal-body rod modification protein FlgD.
   
  
 0.745
SFE55250.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.740
SFE55351.1
UDP-N-acetylglucosamine 4-epimerase.
  
 
0.729
SFE26318.1
Hypothetical protein.
  
 
 0.719
Your Current Organism:
Alteribacillus iranensis
NCBI taxonomy Id: 930128
Other names: A. iranensis, Alteribacillus iranensis (Bagheri et al. 2012) Azmatunnisa Begum et al. 2016, Bacillus iranensis, Bacillus iranensis Bagheri et al. 2012, Bacillus sp. X5B(2010), DSM 23995, IBRC 10446, strain X5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.