STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE56237.1Arginine utilization regulatory protein. (464 aa)    
Predicted Functional Partners:
SFE93826.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
  
 0.796
SFE97848.1
PAS domain S-box-containing protein.
    
 0.724
SFE83220.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
   
 0.654
SFE50716.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.597
SFE51925.1
Two-component system, chemotaxis family, response regulator CheV.
   
 
 0.555
SFE53095.1
Purine-cytosine permease.
     
 0.538
SFE60444.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.515
SFE56263.1
Transposase IS116/IS110/IS902 family protein.
       0.412
Your Current Organism:
Alteribacillus iranensis
NCBI taxonomy Id: 930128
Other names: A. iranensis, Alteribacillus iranensis (Bagheri et al. 2012) Azmatunnisa Begum et al. 2016, Bacillus iranensis, Bacillus iranensis Bagheri et al. 2012, Bacillus sp. X5B(2010), DSM 23995, IBRC 10446, strain X5B
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