STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE63043.1Two-component signal transduction system YycFG, regulatory protein YycH. (439 aa)    
Predicted Functional Partners:
SFE63023.1
Two-component signal transduction system YycFG, regulatory protein YycI.
 
  
 0.985
SFE63062.1
PAS/PAC sensor signal transduction histidine kinase.
 
  
 0.960
SFE63006.1
Phosphoribosyl 1,2-cyclic phosphodiesterase.
  
  
 0.889
SFE63076.1
Two-component system, OmpR family, response regulator VicR.
  
  
 0.795
SFE70768.1
Rod shape-determining protein MreD.
  
     0.765
SFE68773.1
Replicative DNA helicase loader DnaB.
  
     0.718
SFE49497.1
S-layer homology domain-containing protein.
  
     0.717
SFE92301.1
O-Antigen ligase.
  
     0.687
SFE71587.1
Hypothetical protein.
  
     0.682
SFE26670.1
ABC-2 type transport system permease protein.
  
     0.680
Your Current Organism:
Alteribacillus iranensis
NCBI taxonomy Id: 930128
Other names: A. iranensis, Alteribacillus iranensis (Bagheri et al. 2012) Azmatunnisa Begum et al. 2016, Bacillus iranensis, Bacillus iranensis Bagheri et al. 2012, Bacillus sp. X5B(2010), DSM 23995, IBRC 10446, strain X5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.