STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE96528.1Tight adherence protein B. (313 aa)    
Predicted Functional Partners:
SFE96551.1
Pilus assembly protein CpaE.
 
  
 0.987
SFE96545.1
Pilus assembly protein CpaF.
 
  
 0.983
SFE96570.1
Flp pilus assembly protein CpaB.
 
  
 0.979
SFE96612.1
Prepilin peptidase CpaA.
 
  
 0.973
SFE96517.1
Tight adherence protein C.
  
0.964
SFE96603.1
TadE-like protein.
 
  
 0.961
SFE96587.1
Putative Flp pilus-assembly TadE/G-like.
 
  
 0.960
SFE74182.1
Cellulose biosynthesis protein BcsQ.
 
  
 0.944
SFE74197.1
Pilus assembly protein CpaF.
 
  
 0.930
SFE96642.1
Hypothetical protein.
 
     0.889
Your Current Organism:
Alteribacillus iranensis
NCBI taxonomy Id: 930128
Other names: A. iranensis, Alteribacillus iranensis (Bagheri et al. 2012) Azmatunnisa Begum et al. 2016, Bacillus iranensis, Bacillus iranensis Bagheri et al. 2012, Bacillus sp. X5B(2010), DSM 23995, IBRC 10446, strain X5B
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