STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI14601.1Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (595 aa)    
Predicted Functional Partners:
lutB
L-lactate dehydrogenase complex protein LldF; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate.
 
  
 0.945
lutC
L-lactate dehydrogenase complex protein LldG; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
 
  
 0.868
lutA
L-lactate dehydrogenase complex protein LldE; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
 
  
 0.848
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.781
SDI14711.1
Transcriptional regulator, GntR family.
 
  
 0.706
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.461
SDI31502.1
Cysteine-rich domain-containing protein.
  
  
 0.410
SDI05646.1
Glycolate oxidase iron-sulfur subunit.
 
  
 0.403
SDI14586.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
       0.402
SDI14330.1
Glycolate oxidase iron-sulfur subunit.
 
  
 0.400
Your Current Organism:
Alteribacillus bidgolensis
NCBI taxonomy Id: 930129
Other names: A. bidgolensis, Alteribacillus bidgolensis Didari et al. 2012, Bacillus sp. P4B(2010), CCM 7963, CECT 7998, DSM 25260, IBRC-M 10614, KCTC 13821, strain P4B
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