STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI31012.1Glycosyltransferase involved in cell wall bisynthesis. (865 aa)    
Predicted Functional Partners:
SDI30957.1
Anaphase-promoting complex subunit 6.
 
 
 0.989
SDI79018.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
 0.908
SDI30731.1
CBS domain-containing protein.
 
 0.898
SDI30918.1
Uncharacterized conserved protein.
 
    0.895
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.890
SDH44962.1
Signal transduction histidine kinase.
    
 0.863
SDH65229.1
N-terminal domain of peptidoglycan hydrolase CwlO-containing protein.
   
 
 0.863
SDI27783.1
Methyl-accepting chemotaxis protein.
 
  
 0.838
SDI30570.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.827
SDJ21438.1
Signal transduction histidine kinase.
    
 0.824
Your Current Organism:
Alteribacillus bidgolensis
NCBI taxonomy Id: 930129
Other names: A. bidgolensis, Alteribacillus bidgolensis Didari et al. 2012, Bacillus sp. P4B(2010), CCM 7963, CECT 7998, DSM 25260, IBRC-M 10614, KCTC 13821, strain P4B
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