Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV80204.1 | SEV80217.1 | SAMN05192557_0065 | SAMN05192557_0066 | Agmatinase. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.780 |
SEV80204.1 | SEV82526.1 | SAMN05192557_0065 | SAMN05192557_0258 | Agmatinase. | Hypothetical protein; Manually curated. | 0.413 |
SEV80217.1 | SEV80204.1 | SAMN05192557_0066 | SAMN05192557_0065 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Agmatinase. | 0.780 |
SEV80217.1 | SEV82526.1 | SAMN05192557_0066 | SAMN05192557_0258 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Hypothetical protein; Manually curated. | 0.557 |
SEV80217.1 | SEV83996.1 | SAMN05192557_0066 | SAMN05192557_0389 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Glucose-6-phosphate 1-dehydrogenase. | 0.570 |
SEV80217.1 | SEV84872.1 | SAMN05192557_0066 | SAMN05192557_0457 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Zinc transport system permease protein. | 0.492 |
SEV80217.1 | SEW02785.1 | SAMN05192557_0066 | SAMN05192557_1319 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | 0.518 |
SEV80217.1 | SEW07927.1 | SAMN05192557_0066 | SAMN05192557_1527 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Arsenate reductase. | 0.547 |
SEV80217.1 | SEW14958.1 | SAMN05192557_0066 | SAMN05192557_1838 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Manganese/zinc/iron transport system substrate-binding protein. | 0.722 |
SEV80217.1 | SEW14971.1 | SAMN05192557_0066 | SAMN05192557_1839 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Manganese/zinc/iron transport system ATP-binding protein. | 0.811 |
SEV80217.1 | SEW14989.1 | SAMN05192557_0066 | SAMN05192557_1840 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Manganese/zinc/iron transport system permease protein. | 0.525 |
SEV80217.1 | SEW15005.1 | SAMN05192557_0066 | SAMN05192557_1841 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Manganese/zinc/iron transport system permease protein. | 0.772 |
SEV82526.1 | SEV80204.1 | SAMN05192557_0258 | SAMN05192557_0065 | Hypothetical protein; Manually curated. | Agmatinase. | 0.413 |
SEV82526.1 | SEV80217.1 | SAMN05192557_0258 | SAMN05192557_0066 | Hypothetical protein; Manually curated. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.557 |
SEV83996.1 | SEV80217.1 | SAMN05192557_0389 | SAMN05192557_0066 | Glucose-6-phosphate 1-dehydrogenase. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.570 |
SEV83996.1 | SEW07927.1 | SAMN05192557_0389 | SAMN05192557_1527 | Glucose-6-phosphate 1-dehydrogenase. | Arsenate reductase. | 0.552 |
SEV84872.1 | SEV80217.1 | SAMN05192557_0457 | SAMN05192557_0066 | Zinc transport system permease protein. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.492 |
SEV84872.1 | SEW14958.1 | SAMN05192557_0457 | SAMN05192557_1838 | Zinc transport system permease protein. | Manganese/zinc/iron transport system substrate-binding protein. | 0.979 |
SEV84872.1 | SEW14971.1 | SAMN05192557_0457 | SAMN05192557_1839 | Zinc transport system permease protein. | Manganese/zinc/iron transport system ATP-binding protein. | 0.986 |
SEV84872.1 | SEW14989.1 | SAMN05192557_0457 | SAMN05192557_1840 | Zinc transport system permease protein. | Manganese/zinc/iron transport system permease protein. | 0.881 |
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