STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV80875.1Carbamoyl-phosphate synthase small subunit. (361 aa)    
Predicted Functional Partners:
SEV80850.1
Aspartate carbamoyltransferase.
 
 0.999
SEV80862.1
Dihydroorotase.
  
 0.999
SEV80889.1
Carbamoyl-phosphate synthase large subunit.
 0.999
SEV80922.1
Orotidine-5'-phosphate decarboxylase.
  
  
 0.987
SEV80898.1
Dihydroorotate dehydrogenase electron transfer subunit.
  
 
 0.986
SEV80937.1
Orotate phosphoribosyltransferase.
  
  
 0.983
SEV80908.1
Dihydroorotate oxidase B, catalytic subunit.
 
  
 0.979
SEV80840.1
Uracil permease.
  
  
 0.964
SEW03541.1
Amidophosphoribosyltransferase.
 
 
 0.961
SEW03507.1
Phosphoribosylformylglycinamidine synthase subunit I.
  
 
  0.949
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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