STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV81018.1Starch synthase. (468 aa)    
Predicted Functional Partners:
SEV80980.1
1,4-alpha-glucan branching enzyme.
 
 0.999
SEV80995.1
Glucose-1-phosphate adenylyltransferase.
 
 0.999
SEV81009.1
Glucose-1-phosphate adenylyltransferase.
 
 0.999
SEW15839.1
Maltodextrin phosphorylase.
 
 0.971
SEV80969.1
Pullulanase.
 
 0.932
SEW15549.1
Pullulanase, extracellular.
 
 
 0.871
SEW15821.1
4-alpha-glucanotransferase.
 
 
 0.849
SEW02306.1
Alpha amylase, catalytic domain.
  
 
 0.779
SEV80772.1
Alcohol dehydrogenase, class IV.
   
    0.667
SEV80956.1
Phosphoglucomutase.
  
  
 0.620
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.