STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV81032.1Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. (574 aa)    
Predicted Functional Partners:
SEW06000.1
Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.
  
 
   0.854
SEV96834.1
LSU ribosomal protein L13P.
    
   0.835
SEV96458.1
LSU ribosomal protein L6P.
    
   0.833
SEV96392.1
LSU ribosomal protein L5P.
   
   0.831
SEV96170.1
LSU ribosomal protein L2P.
    
   0.830
SEV96474.1
Large subunit ribosomal protein L18.
    
   0.830
SEW06585.1
LSU ribosomal protein L11P.
    
   0.829
SEV96151.1
LSU ribosomal protein L23P.
    
   0.828
SEV96350.1
LSU ribosomal protein L14P.
    
   0.827
SEV96211.1
Large subunit ribosomal protein L22.
    
   0.826
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.