STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV81536.1tRNA (Guanine37-N(1)-) methyltransferase. (222 aa)    
Predicted Functional Partners:
SEV81551.1
LSU ribosomal protein L19P.
 
  
 0.996
SEV81521.1
16S rRNA processing protein RimM.
 
  
 0.992
SEV81488.1
SSU ribosomal protein S16P.
 
  
 0.989
SEW06440.1
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
  
   0.928
SEV96133.1
LSU ribosomal protein L4P.
   
    0.925
SEV96170.1
LSU ribosomal protein L2P.
   
    0.925
SEV96543.1
Protein translocase subunit secY/sec61 alpha.
   
  
 0.925
SEV96098.1
SSU ribosomal protein S10P.
   
    0.924
SEV96151.1
LSU ribosomal protein L23P.
   
    0.924
SEV87257.1
SSU ribosomal protein S4P.
  
  
 0.917
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.