STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV82937.1ATPase components of ABC transporters with duplicated ATPase domains. (534 aa)    
Predicted Functional Partners:
SEV96392.1
LSU ribosomal protein L5P.
   
  0.924
SEV96414.1
SSU ribosomal protein S14P.
   
  0.923
SEW06602.1
LSU ribosomal protein L1P.
   
  0.923
SEW06701.1
SSU ribosomal protein S12P.
   
 0.923
SEV96170.1
LSU ribosomal protein L2P.
   
  0.922
SEW06455.1
glutamyl-tRNA synthetase /glutamate--tRNA(Gln) ligase.
   
  0.788
SEV81882.1
LSU ribosomal protein L7AE.
   
  0.786
SEV85965.1
LSU ribosomal protein L21P.
   
   0.775
SEV96133.1
LSU ribosomal protein L4P.
   
 
 0.774
SEV81938.1
SSU ribosomal protein S15P.
   
   0.772
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.