STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV83982.1RNAse Z. (307 aa)    
Predicted Functional Partners:
SEV83996.1
Glucose-6-phosphate 1-dehydrogenase.
  
    0.631
SEV84010.1
AraC-type DNA-binding protein.
       0.530
SEV86550.1
tRNA nucleotidyltransferase (CCA-adding enzyme).
  
  
 0.490
SEV83452.1
ATP-dependent DNA helicase DinG.
  
  
 0.473
SEV85765.1
histidyl-tRNA synthetase.
    
 
 0.443
SEV95592.1
Putative hydrolase of the HAD superfamily.
 
    0.433
SEW00994.1
RNAse R.
  
  
 0.429
SEW19422.1
ABC-2 type transport system ATP-binding protein.
  
     0.427
SEV81893.1
Bacterial translation initiation factor 2 (bIF-2).
    
 
 0.405
SEV81201.1
Thiamine pyrophosphokinase.
    
  0.403
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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