STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV85051.1Cytidine deaminase. (136 aa)    
Predicted Functional Partners:
SEW16014.1
Pyrimidine-nucleoside phosphorylase.
 
 0.997
SEV85039.1
GTP-binding protein Era.
  
    0.946
SEV83143.1
Purine-nucleoside phosphorylase.
  
 
 0.927
SEW11739.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Manually curated.
    
  0.908
SEW06978.1
Hypothetical protein.
 
   
  0.906
SEV85089.1
Phosphate starvation-inducible protein PhoH.
  
    0.900
SEV85076.1
Probable rRNA maturation factor.
  
  
 0.879
SEV85026.1
DNA replication and repair protein RecO.
  
    0.863
SEW01520.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family.
    
  0.860
SEV85063.1
Undecaprenol kinase.
  
    0.840
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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