STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV85353.1Methyltransferase domain-containing protein. (237 aa)    
Predicted Functional Partners:
SEV85403.1
RNA-binding protein.
 
     0.910
SEV85364.1
Ribosome-associated protein.
       0.847
SEV85379.1
Putative HD superfamily hydrolase of NAD metabolism.
       0.847
SEV85391.1
Nicotinate-nucleotide adenylyltransferase.
       0.847
SEV85415.1
Shikimate dehydrogenase.
       0.838
SEV85427.1
Hypothetical protein.
       0.838
SEV85439.1
Hypothetical protein.
       0.838
SEV85465.1
Adenosylhomocysteine nucleosidase; Manually curated.
       0.730
SEV85341.1
Competence protein ComEA.
       0.719
SEV85318.1
Competence protein ComEC.
       0.621
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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