STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV86595.1GTP-binding protein HflX. (400 aa)    
Predicted Functional Partners:
SEV86635.1
LSU ribosomal protein L20P.
   
   0.902
SEW06585.1
LSU ribosomal protein L11P.
    
 
 0.891
SEV86650.1
LSU ribosomal protein L35P.
  
   0.883
SEV86579.1
Cystathionine beta-lyase family protein involved in aluminum resistance.
 
    0.881
SEV80522.1
LSU ribosomal protein L32P.
    
 
 0.864
SEV96115.1
LSU ribosomal protein L3P.
    
 
 0.864
SEV81551.1
LSU ribosomal protein L19P.
   
   0.858
SEV96133.1
LSU ribosomal protein L4P.
    
 
 0.858
SEV85965.1
LSU ribosomal protein L21P.
   
   0.856
SEV96834.1
LSU ribosomal protein L13P.
    
 
 0.856
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.