STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV87627.1Transcriptional regulator, LacI family. (330 aa)    
Predicted Functional Partners:
SEV79970.1
Phosphocarrier protein.
   
 
 0.830
SEV86932.1
Pyruvate kinase.
    
 
 0.812
SEV81716.1
Transcriptional pleiotropic repressor.
    
 
 0.724
SEW17246.1
Inosine-5'-monophosphate dehydrogenase.
    
 
 0.709
SEW17264.1
GMP synthase (glutamine-hydrolyzing).
    
   0.705
SEV82259.1
phenylalanyl-tRNA synthetase beta subunit.
    
   0.626
SEW05660.1
methionyl-tRNA synthetase.
    
   0.626
SEV80956.1
Phosphoglucomutase.
    
 0.625
SEW02306.1
Alpha amylase, catalytic domain.
 
 
 0.608
SEW05915.1
Ribose-phosphate pyrophosphokinase.
    
 0.604
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.