STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV87823.1Succinyl-diaminopimelate desuccinylase. (469 aa)    
Predicted Functional Partners:
SEV99078.1
Glutamine--fructose-6-phosphate transaminase.
   
 0.896
SEV87836.1
Hypothetical protein.
       0.645
SEV87790.1
tRNA (guanine-N(7)-)-methyltransferase.
    
  0.637
SEW11136.1
Peptidase T. Metallo peptidase. MEROPS family M20B.
    
 0.578
SEW00003.1
Aminodeoxychorismate synthase, subunit I.
  
 0.529
SEW17246.1
Inosine-5'-monophosphate dehydrogenase.
  
  
 0.518
SEV80862.1
Dihydroorotase.
  
 
 0.517
SEV87772.1
Cystathione beta-lyase.
    
  0.511
SEV80908.1
Dihydroorotate oxidase B, catalytic subunit.
  
 0.504
SEV87851.1
16S rRNA pseudouridine516 synthase.
       0.496
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.