STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV87943.1Putative rRNA methylase. (186 aa)    
Predicted Functional Partners:
SEV87931.1
Hypothetical protein.
    0.978
SEV95428.1
Glyoxylase, beta-lactamase superfamily II.
   
   0.825
SEV80552.1
MraZ protein.
  
  
 0.728
SEV96852.1
SSU ribosomal protein S9P.
   
 
 0.709
SEV92389.1
SSU ribosomal protein S6P.
    
 
 0.704
SEV81488.1
SSU ribosomal protein S16P.
   
   0.700
SEV80580.1
Cell division protein FtsL.
  
  
 0.668
SEV96098.1
SSU ribosomal protein S10P.
   
 
 0.663
SEW06701.1
SSU ribosomal protein S12P.
   
 
 0.663
SEV96486.1
SSU ribosomal protein S5P.
    
 
 0.660
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.